Sr Data Engineer – Clinical Genomic

Baylor Genetics

Posted on: August 13, 2024

Closing: September 12, 2024

Position Type: Full Time

Job Description

A seasoned data engineer with strong knowledge and hands-on experience on clinical genomic data analytics, knowledge management, data engineering, cloud computing, as well as data platform design and development.

 

 

QUALIFICATIONS:

 

  • Education:
    • Master's or higher degree in Data Science, Computer Science/Engineering, Biomedical engineering, or related field with five (5) years of experience in genomic data analysis and software development.

 

  • Experience:
    • Hands-on experience in human genetics/multi-omics data analysis and software development especially in next-generation sequencing data
    • Hands-on experience in clinical genotype and phenotype data analysis and modeling
    • Hands-on experience in data ETL, data management, and data sharing for genomic and clinical applications, especially for next generation sequencing data
    • Hands-on experience with databases, including SQL and no-SQL
    • Hands-on experience with scripting language, such as Bash and Python
    • Hands-on experience in cloud platform (Azure) and commercial data platforms (data lakehouse/data warehouse)
    • Familiarity with commercial/open-source data analytical platforms
    • Familiarity with advanced data visualization techniques
    • Familiarity with clinical actionable variant interpretation and classification
    • DevOps experience such as unit testing, CI/CD is a plus.
    • Strong curiosity and the ability to learn quickly and adapt to a fast-changing environment

DUTIES AND RESPONSIBILITIES:

 

  • Serves as the SME in clinical genomic data analysis, ETL, management and engineering. Provides hands-on support towards building company’s next-generation data analytical platform
  • Designs, develops, evaluates, and deploys state-of-the-art analytical solutions to gain valuable data insights based on the genetical, phenotypical, and clinical datasets
  • Evaluates, organizes, and manages company’s valuable data assets
  • Designs cloud-based data model/schema to efficiently manage and query large scale genomic dataset
  • Supports both internal and external data requirements by leveraging AI/ML and GenAI capabilities to keep up with the increasing demands of the business
  • Collaborates in a multidisciplinary and regulated clinical diagnostics environment with geneticists, bioinformaticians, software engineers, and IT infrastructure professionals

 

 

PHYSICAL DEMANDS AND WORK ENVIRONMENT:

 

  • Frequently required to sit
  • Frequently required to stand
  • Frequently required to utilize hand and finger dexterity
  • Frequently required to talk or hear
  • Frequently required to utilize visual acuity to operate equipment, read technical information, and/or use a keyboard
  • Occasionally exposed to bloodborne and airborne pathogens or infectious materials

 

Baylor Genetics

Posted on: August 13, 2024

Closing: September 12, 2024

Position Type: Full Time

This role is part of a curated selection of life science opportunities featured on Xtalks. Employers may request edits or removal here.

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