Sr Data Engineer – Clinical Genomic
Anywhere, United States
Job Description
A seasoned data engineer with strong knowledge and hands-on experience on clinical genomic data analytics, knowledge management, data engineering, cloud computing, as well as data platform design and development.
QUALIFICATIONS:
- Education:
- Master's or higher degree in Data Science, Computer Science/Engineering, Biomedical engineering, or related field with five (5) years of experience in genomic data analysis and software development.
- Experience:
-
- Hands-on experience in human genetics/multi-omics data analysis and software development especially in next-generation sequencing data
- Hands-on experience in clinical genotype and phenotype data analysis and modeling
- Hands-on experience in data ETL, data management, and data sharing for genomic and clinical applications, especially for next generation sequencing data
- Hands-on experience with databases, including SQL and no-SQL
- Hands-on experience with scripting language, such as Bash and Python
- Hands-on experience in cloud platform (Azure) and commercial data platforms (data lakehouse/data warehouse)
- Familiarity with commercial/open-source data analytical platforms
- Familiarity with advanced data visualization techniques
- Familiarity with clinical actionable variant interpretation and classification
- DevOps experience such as unit testing, CI/CD is a plus.
- Strong curiosity and the ability to learn quickly and adapt to a fast-changing environment
DUTIES AND RESPONSIBILITIES:
- Serves as the SME in clinical genomic data analysis, ETL, management and engineering. Provides hands-on support towards building company’s next-generation data analytical platform
- Designs, develops, evaluates, and deploys state-of-the-art analytical solutions to gain valuable data insights based on the genetical, phenotypical, and clinical datasets
- Evaluates, organizes, and manages company’s valuable data assets
- Designs cloud-based data model/schema to efficiently manage and query large scale genomic dataset
- Supports both internal and external data requirements by leveraging AI/ML and GenAI capabilities to keep up with the increasing demands of the business
- Collaborates in a multidisciplinary and regulated clinical diagnostics environment with geneticists, bioinformaticians, software engineers, and IT infrastructure professionals
PHYSICAL DEMANDS AND WORK ENVIRONMENT:
- Frequently required to sit
- Frequently required to stand
- Frequently required to utilize hand and finger dexterity
- Frequently required to talk or hear
- Frequently required to utilize visual acuity to operate equipment, read technical information, and/or use a keyboard
- Occasionally exposed to bloodborne and airborne pathogens or infectious materials
Apply
Career Focus: Biostatistics/Bioinformatics, Clinical Operations, Data Management/Data Science, Engineer
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